AI Developer and Researcher

Agam Chopra Ph.D.

I am an AI/ML researcher and developer specializing in multimodal learning, generative AI, computer vision, and scalable deep learning systems, with experience spanning biomedical imaging, representation learning, and applied AI. My future research focuses on developing biologically inspired, gradient-free ANN learning algorithms modeled on principles of brain development and learning.

Experience

Research & Engineering

AI Developer

Willmeng Construction Inc. — Phoenix, AZ (Full-time, Remote)

Sep 2026 – Present

AI Consultant

J.S. Chopra & Associates — Remote, USA

Jul 2024 – Present
  • Built Python/SQL/PyTorch tools for audit automation, fraud review, anomaly detection, and model monitoring.

Doctoral Researcher

KurtLab, University of Washington — Seattle, WA

Sep 2022 – Jul 2026
  • Addressed limited access to expensive clinical biomarkers by designing novel controllable multimodal generative models for MRI to Tau-PET synthesis, including advanced vector quantization and information theory methods that improved quantitative performance metrics, interpretation, and clinician trust for Alzheimer's imaging research and technology adoption.
  • Solved reproducibility and scale bottlenecks in 3D medical AI by building efficient PyTorch/CUDA preprocessing, training, and evaluation libraries; enabled experimentation at scale across Linux and HPC environments.
  • Led model development across tumor synthesis, inpainting, classification, survival prediction, and registration workloads; achieved top placements in BraTS challenges from 2022 to 2024.
  • Collaborated with Microsoft on clinically aligned LLM/VLM evaluation for complex medical datasets and with Amazon Robotics on 3D scene generation and damage estimation pipelines; translated research into applied AI workflows across healthcare and industrial environments.
  • Secured 2 competitive research awards for AI imaging proposals, including an Amazon research grant and a University of Washington internal data science grant.

Graduate Teaching Assistant

University of Washington — Seattle, WA, USA

Jan 2023 – Jun 2025
  • Taught computational engineering through lectures, labs, office hours, and Python/C/C++ support for 200+ students studying numerical methods, optimization, scientific programming, and reproducible debugging.

Graduate Research Assistant

Stevens Institute of Technology — Hoboken, NJ

Jan 2021 – Jan 2022
  • Developed deep learning, preprocessing, and evaluation workflows for 4D accelerated-MRI registration, improving temporal consistency and alignment over classical baselines.

Full-Stack Software Engineer

Reindeer Shuttle Inc. — West Lafayette, IN, USA

May 2018 – Jun 2020
  • Built Python, SQL, JavaScript, and TypeScript tools for operations, demand forecasting, and business intelligence.

Education

Academic Training

July 2026

Ph.D., Mechanical Engineering

Department of Mechanical Engineering, Biomedical AI and Computer Vision

University of Washington, Seattle, WA

May 2022

M.S., Computer Science and Machine Learning

Stevens Institute of Technology, Hoboken, NJ

May 2020

B.S., Physics

Purdue University, West Lafayette, IN

Research Publications

Research Record

  1. Partial Information Decomposition as a Multi-Contrast 3D MRI Selection Strategy for Resource-Constrained Deep Neural Network Training in Brain Tumor Segmentation. Chopra, A.; Kurt, M. Manuscript submitted to MICCAI 2026; preprint available at arXiv, 2026.
  2. SFL-Net: Source-Factorized Latent Representation Learning for Multi-Contrast MRI to Tau-PET Synthesis. Chopra, A.; Neher, C.; Ren, T.; Rivera, J. E. H.; Jahanian, H.; Kurt, M. Manuscript submitted to IEEE TMI; preprint available at arXiv, 2026.
  3. Here Comes the Explanation: A Shapley Perspective on Multi-contrast Medical Image Segmentation. Ren, T.; Rivera, J. E. H.; Chopra, A.; Oswal, H.; Pan, Y.; Ruzevick, J.; Kurt, M. arXiv, 2025.
  4. 3D Inception-based TransMorph: Pre- and Post-operative Multi-contrast MRI Registration in Brain Tumors. Abderezaei, J.; Pionteck, A.; Chopra, A.; Kurt, M. BrainLes / Springer LNCS, 2024.
  5. Re-DiffiNet: Modeling Discrepancies in Tumor Segmentation Using Diffusion Models. Ren, T.; Sharma, A.; Rivera, J. E. H.; Rebala, H.; Honey, E.; Chopra, A.; Ruzevick, J.; Kurt, M. arXiv, 2024.
  6. An Ensemble Approach for Brain Tumor Segmentation and Synthesis. Heras Rivera, J. E.; Chopra, A.; Ren, T.; Oswal, H.; Pan, Y.; Sordo, Z.; Walters, S. arXiv, 2024.
  7. An Optimization Framework for Processing and Transfer Learning for Brain Tumor Segmentation. Ren, T.; Honey, E.; Rebala, H.; Sharma, A.; Chopra, A.; Kurt, M. MICCAI Challenge / Springer, 2023.
  8. VIT-FNO; A Robust Model For Tracking Motion In 4d-mri. Chopra, A.; Pionteck, A.; Abderezaei, J.; Kurt, M. Summer Biomechanics, Bioengineering, and Biotransport Conference (SB3C), June 20–23, 2022, Eastern Shore, MD, USA.
  9. The Brain Tumor Sequence Registration (BraTS-Reg) Challenge: Establishing Correspondence Between Pre-operative and Follow-up MRI Scans of Diffuse Glioma Patients. Baheti, B.; Chakrabarty, S.; Akbari, H.; Bilello, M.; Wiestler, B.; Schwarting, J.; Chopra, A.; et al. arXiv, 2021.

Technical Skills

Technical Toolkit

Languages

  • Python
  • C
  • C++
  • SQL
  • JavaScript
  • TypeScript
  • MATLAB

ML / AI

  • PyTorch
  • CUDA
  • Transformers
  • LLMs
  • VLMs
  • Latent Diffusion
  • Reinforcement Learning
  • Computer Vision
  • Multimodal Learning
  • Medical Imaging
  • Self-supervised Learning
  • Synthesis
  • Classification

Systems

  • Linux
  • Git
  • LaTeX
  • Docker
  • Singularity
  • Azure
  • HPC
  • MLOps
  • Data Pipelines
  • Experimentation Frameworks

Strengths

  • AI research
  • Model development
  • Production engineering
  • Open-source tooling
  • Technical mentoring
  • Cross-functional collaboration